DOI: 10.18129/B9.bioc.KEGGprofile    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see KEGGprofile.

An annotation and visualization package for multi-types and multi-groups expression data in KEGG pathway

Bioconductor version: 3.9

KEGGprofile is an annotation and visualization tool which integrated the expression profiles and the function annotation in KEGG pathway maps. The multi-types and multi-groups expression data can be visualized in one pathway map. KEGGprofile facilitated more detailed analysis about the specific function changes inner pathway or temporal correlations in different genes and samples.

Author: Shilin Zhao, Yan Guo, Yu Shyr

Maintainer: Shilin Zhao <shilin.zhao at>

Citation (from within R, enter citation("KEGGprofile")):


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if (!requireNamespace("BiocManager", quietly = TRUE))


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PDF R Script KEGGprofile: Application Examples
PDF   Reference Manual
Text   NEWS


biocViews KEGG, Pathways, Software
Version 1.26.0
In Bioconductor since BioC 2.11 (R-2.15) (7 years)
License GPL (>= 2)
Depends RCurl
Imports AnnotationDbi, png, TeachingDemos, XML, KEGG.db, KEGGREST, biomaRt
Depends On Me
Imports Me
Suggests Me IntramiRExploreR
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Source Package KEGGprofile_1.26.0.tar.gz
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