EBarrays

DOI: 10.18129/B9.bioc.EBarrays    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see EBarrays.

Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification

Bioconductor version: 3.9

EBarrays provides tools for the analysis of replicated/unreplicated microarray data.

Author: Ming Yuan, Michael Newton, Deepayan Sarkar and Christina Kendziorski

Maintainer: Ming Yuan <myuan at isye.gatech.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBarrays")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBarrays")

 

PDF	R Script	Introduction to EBarrays
PDF		Reference Manual

Details

biocViews	Clustering, DifferentialExpression, Software
Version	2.48.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 14.5 years)
License	GPL (>= 2)
Depends	R (>= 1.8.0), Biobase, lattice, methods
Imports	Biobase, cluster, graphics, grDevices, lattice, methods, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	EBcoexpress, gaga, geNetClassifier
Imports Me	casper
Suggests Me	Category, dcanr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	EBarrays_2.48.0.tar.gz
Windows Binary	EBarrays_2.48.0.zip
Mac OS X 10.11 (El Capitan)	EBarrays_2.48.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/EBarrays
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/EBarrays
Package Short Url	https://bioconductor.org/packages/EBarrays/
Package Downloads Report	Download Stats