DOI: 10.18129/B9.bioc.rhdf5client    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see rhdf5client.

Access HDF5 content from h5serv

Bioconductor version: 3.8

Provides functionality for reading data from h5serv server from within R.

Author: Samuela Pollack [cre, aut], Shweta Gopaulakrishnan [aut], Vincent Carey [aut]

Maintainer: Samuela Pollack <spollack at jimmy.harvard.edu>

Citation (from within R, enter citation("rhdf5client")):


To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script h5client -- notes on Bioconductor and remote HDF5
HTML R Script HSDSArray DelayedArray backend
HTML R Script Multidimensional verification
HTML R Script Objects and methods in rhdf5client
PDF   Reference Manual
Text   NEWS


biocViews DataImport, Software
Version 1.4.1
In Bioconductor since BioC 3.6 (R-3.4) (1.5 years)
License Artistic-2.0
Depends R (>= 3.5), methods, DelayedArray
Imports S4Vectors, httr, R6, rjson, utils
Suggests knitr, testthat, BiocStyle, DT, reticulate
Depends On Me
Imports Me restfulSE
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rhdf5client_1.4.1.tar.gz
Windows Binary rhdf5client_1.4.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) rhdf5client_1.4.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/rhdf5client
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rhdf5client
Package Short Url http://bioconductor.org/packages/rhdf5client/
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