DOI: 10.18129/B9.bioc.rhdf5    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see rhdf5.

HDF5 interface to R

Bioconductor version: 3.7

This package provides an interface between HDF5 and R. HDF5's main features are the ability to store and access very large and/or complex datasets and a wide variety of metadata on mass storage (disk) through a completely portable file format. The rhdf5 package is thus suited for the exchange of large and/or complex datasets between R and other software package, and for letting R applications work on datasets that are larger than the available RAM.

Author: Bernd Fischer [aut], Gregoire Pau [aut], Mike Smith [aut, cre], Martin Morgan [ctb], Daniel van Twisk [ctb]

Maintainer: Mike Smith <mike.smith at embl.de>

Citation (from within R, enter citation("rhdf5")):


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biocViews DataImport, Infrastructure, Software
Version 2.24.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 13.5 years)
License Artistic-2.0
Depends methods
Imports Rhdf5lib
LinkingTo Rhdf5lib
Suggests bit64, BiocStyle, knitr, rmarkdown, testthat
Depends On Me GSCA, HDF5Array
Imports Me beachmat, biomformat, diffHic, DmelSGI, DOQTL, DropletUtils, h5vc, IONiseR, phantasus, PureCN, scater, scone
Suggests Me slalom, SummarizedExperiment, tximport
Links To Me
Build Report  

Package Archives

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Source Package rhdf5_2.24.0.tar.gz
Windows Binary rhdf5_2.24.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) rhdf5_2.24.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/rhdf5
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rhdf5
Package Short Url http://bioconductor.org/packages/rhdf5/
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