DOI: 10.18129/B9.bioc.destiny    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see destiny.

Creates diffusion maps

Bioconductor version: 3.7

Create and plot diffusion maps.

Author: Philipp Angerer [cre, aut], Laleh Haghverdi [ctb], Maren Büttner [ctb], Fabian Theis [ctb], Carsten Marr [ctb], Florian Büttner [ctb]

Maintainer: Philipp Angerer <philipp.angerer at>

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PDF Diffusion-Map-recap.pdf
PDF Diffusion-Maps.pdf
PDF Global-Sigma.pdf
PDF tidyverse.pdf
PDF   Reference Manual
Text   NEWS


biocViews CellBasedAssays, CellBiology, Clustering, Software, Visualization
Version 2.10.2
In Bioconductor since BioC 3.2 (R-3.2) (3 years)
License GPL
Depends R (>= 3.3.0)
Imports methods, graphics, grDevices, utils, stats, Matrix, Rcpp (>= 0.10.3), RcppEigen, Biobase, BiocGenerics, SummarizedExperiment, ggplot2, ggthemes, VIM, proxy, igraph, smoother, scales, scatterplot3d
LinkingTo Rcpp, RcppEigen, grDevices
Suggests nbconvertR, testthat, FNN, tidyr, SingleCellExperiment
SystemRequirements C++11
Enhances rgl, SingleCellExperiment
Depends On Me simpleSingleCell
Imports Me cytofkit
Suggests Me monocle, scater
Links To Me
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