FDb.FANTOM4.promoters.hg19

DOI: 10.18129/B9.bioc.FDb.FANTOM4.promoters.hg19    

Annotation package for FANTOM4 promoters identified from THP-1 cells

Bioconductor version: Release (3.6)

FANTOM4 promoters, liftOver'ed from hg18 to hg19, CpGs quantified

Author: Tim Triche, Jr.

Maintainer: Tim Triche, Jr. <tim.triche at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("FDb.FANTOM4.promoters.hg19")

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, Homo_sapiens
Version	1.0.0
License	Artistic-2.0
Depends	GenomicFeatures(>= 1.7.22), Biostrings
Imports	GenomicFeatures, AnnotationDbi
LinkingTo
Suggests	BSgenome.Hsapiens.UCSC.hg19, rtracklayer, matrixStats
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	FDb.FANTOM4.promoters.hg19_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	http://bioconductor.org/packages/FDb.FANTOM4.promoters.hg19/
Package Downloads Report	Download Stats