genbankr

DOI: 10.18129/B9.bioc.genbankr    

Parsing GenBank files into semantically useful objects

Bioconductor version: Release (3.6)

Reads Genbank files.

Author: Gabriel Becker [aut, cre], Michael Lawrence [aut]

Maintainer: Gabriel Becker <becker.gabriel at gene.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("genbankr")

Documentation

HTML	R Script	An introduction to genbankr
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, Infrastructure, Software
Version	1.6.1
In Bioconductor since	BioC 3.3 (R-3.3) (2 years)
License	Artistic-2.0
Depends	methods
Imports	BiocGenerics, IRanges, GenomicRanges(>= 1.23.24), GenomicFeatures, Biostrings, VariantAnnotation, rtracklayer, S4Vectors, GenomeInfoDb, Biobase
LinkingTo
Suggests	RUnit, rentrez (>= 1.2.1), knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	genbankr_1.6.1.tar.gz
Windows Binary	genbankr_1.6.1.zip
Mac OS X 10.11 (El Capitan)	genbankr_1.6.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/genbankr
Package Short Url	http://bioconductor.org/packages/genbankr/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.6	Source Archive