flowCHIC

DOI: 10.18129/B9.bioc.flowCHIC    

Analyze flow cytometric data using histogram information

Bioconductor version: Release (3.6)

A package to analyze flow cytometric data of complex microbial communities based on histogram images

Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>

Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowCHIC")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowCHIC")

 

PDF	R Script	Analyze flow cytometric data using histogram information
PDF		Reference Manual

Details

biocViews	CellBasedAssays, Clustering, FlowCytometry, Software, Visualization
Version	1.12.0
In Bioconductor since	BioC 3.0 (R-3.1) (3.5 years)
License	GPL-2
Depends	R (>= 3.1.0)
Imports	methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid
LinkingTo
Suggests
SystemRequirements
Enhances
URL	http://www.ufz.de/index.php?en=16773
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowCHIC_1.12.0.tar.gz
Windows Binary	flowCHIC_1.12.0.zip
Mac OS X 10.11 (El Capitan)	flowCHIC_1.12.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowCHIC
Package Short Url	http://bioconductor.org/packages/flowCHIC/
Package Downloads Report	Download Stats