epivizrChart

DOI: 10.18129/B9.bioc.epivizrChart    

R interface to epiviz web components

Bioconductor version: Release (3.6)

This package provides an API for interactive visualization of genomic data using epiviz web components. Objects in R/BioConductor can be used to generate interactive R markdown/notebook documents or can be visualized in the R Studio's default viewer.

Author: Brian Gottfried [aut], Jayaram Kancherla [aut], Hector Corrada Bravo [aut, cre]

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("epivizrChart")

Documentation

HTML	R Script	Introduction to epivizrChart
PDF		Reference Manual
Text		NEWS

Details

biocViews	GUI, Software, Visualization
Version	1.0.0
License	Artistic-2.0
Depends	R (>= 3.4.0)
Imports	epivizrData(>= 1.5.1), epivizrServer, htmltools, rjson, methods
LinkingTo
Suggests	testthat, roxygen2, knitr, Biobase, GenomicRanges, S4Vectors, IRanges, SummarizedExperiment, antiProfilesData, hgu133plus2.db, Mus.musculus, BiocStyle, Homo.sapiens
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	epivizrChart_1.0.0.tar.gz
Windows Binary	epivizrChart_1.0.0.zip
Mac OS X 10.11 (El Capitan)	epivizrChart_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/epivizrChart
Package Short Url	http://bioconductor.org/packages/epivizrChart/
Package Downloads Report	Download Stats