BiocSklearn

DOI: 10.18129/B9.bioc.BiocSklearn    

interface to python sklearn via Rstudio reticulate

Bioconductor version: Release (3.6)

This package provides interfaces to selected sklearn elements, and demonstrates fault tolerant use of python modules requiring extensive iteration.

Author: Vince Carey

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocSklearn")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocSklearn")

 

PDF	R Script	BiocSklearn overview
PDF		Reference Manual

Details

biocViews	DimensionReduction, Infrastructure, Software, StatisticalMethod
Version	1.0.2
License	Artistic-2.0
Depends	R (>= 3.4.0), reticulate, methods, SummarizedExperiment, knitr
Imports	BBmisc
LinkingTo
Suggests	testthat, restfulSE
SystemRequirements	python (>= 2.7), sklearn, numpy, pandas, h5py
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BiocSklearn_1.0.2.tar.gz
Windows Binary	BiocSklearn_1.0.2.zip
Mac OS X 10.11 (El Capitan)	BiocSklearn_1.0.2.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BiocSklearn
Package Short Url	http://bioconductor.org/packages/BiocSklearn/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.6	Source Archive