To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("aracne.networks")

In most cases, you don't need to download the package archive at all.

aracne.networks

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see aracne.networks.

ARACNe-inferred gene networks from TCGA tumor datasets

Bioconductor version: 3.4

This package contains ARACNe-inferred networks from TCGA tumor datasets. It also contains a function to export them into plain-text format.

Author: Federico M. Giorgi

Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>, Mariano Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("aracne.networks")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("aracne.networks")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("aracne.networks")

biocViews	CancerData, ExperimentData, Genome, Homo_sapiens_Data
Version	1.0.0
License	file LICENSE
Depends	R (>= 3.3), viper
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	aracne.networks_1.0.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/aracne.networks/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: