To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")

In most cases, you don't need to download the package archive at all.

EGSEAdata

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see EGSEAdata.

Gene set collections for the EGSEA package

Bioconductor version: 3.4

This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.

Author: Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth

Maintainer: Monther Alhamdoosh <m.hamdoosh at gmail.com>

Citation (from within R, enter citation("EGSEAdata")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")

Documentation


PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	ExperimentData
Version	1.2.0
License	file LICENSE
Depends	R (>= 3.3)
Imports
LinkingTo
Suggests	EGSEA
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	EGSEA
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	EGSEAdata_1.2.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/EGSEAdata/
Package Downloads Report	Download Stats

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