To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

In most cases, you don't need to download the package archive at all.

pRolocGUI

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see pRolocGUI.

Interactive visualisation of spatial proteomics data

Bioconductor version: 3.4

The package pRolocGUI comprises functions to interactively visualise organelle (spatial) proteomics data on the basis of pRoloc, pRolocdata and shiny.

Author: Lisa M Breckels, Thomas Naake and Laurent Gatto

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>, Lisa M Breckels <lms79 at cam.ac.uk>

Citation (from within R, enter citation("pRolocGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

Documentation

HTML	R Script	pRolocGUI - Interactive visualisation of spatial proteomics data
PDF		Reference Manual
Text		NEWS
Video		pRoloc, pRolocdata and pRolocGUI

Details

biocViews	GUI, Proteomics, Software, Visualization
Version	1.8.2
In Bioconductor since	BioC 3.0 (R-3.1) (2.5 years)
License	GPL-2
Depends	methods, R (>= 3.1.0), pRoloc(>= 1.11.1), Biobase, MSnbase(>= 1.13.11)
Imports	shiny (>= 0.9.1), scales, dplyr, DT (>= 0.1.40), graphics, utils
LinkingTo
Suggests	pRolocdata, knitr, BiocStyle, rmarkdown
SystemRequirements
Enhances
URL	http://ComputationalProteomicsUnit.github.io/pRolocGUI/
BugReports	https://github.com/ComputationalProteomicsUnit/pRolocGUI/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	pRolocGUI_1.8.2.tar.gz
Windows Binary	pRolocGUI_1.8.2.zip
Mac OS X 10.9 (Mavericks)	pRolocGUI_1.8.2.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/pRolocGUI/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/pRolocGUI/
Package Downloads Report	Download Stats

Documentation »

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