To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mygene")
In most cases, you don't need to download the package archive at all.
mygene
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see mygene.
Access MyGene.Info_ services
Bioconductor version: 3.4
MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It's designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.
Author: Adam Mark, Ryan Thompson, Cyrus Afrasiabi, Chunlei Wu
Maintainer: Adam Mark, Cyrus Afrasiabi, Chunlei Wu <cwu at scripps.edu>
Citation (from within R,
enter citation("mygene")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mygene")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mygene")
| R Script | Using mygene.R | |
| Reference Manual |
Details
| biocViews | Annotation, Software |
| Version | 1.10.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (2.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.2.1), GenomicFeatures |
| Imports | httr (>= 0.3), jsonlite (>= 0.9.7), S4Vectors, Hmisc, sqldf, plyr |
| LinkingTo | |
| Suggests | BiocStyle |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | MetaboSignal |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | mygene_1.10.0.tar.gz |
| Windows Binary | mygene_1.10.0.zip |
| Mac OS X 10.9 (Mavericks) | mygene_1.10.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/mygene/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/mygene/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
