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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowPloidy")
In most cases, you don't need to download the package archive at all.
flowPloidy
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see flowPloidy.
Analyze flow cytometer data to determine sample ploidy
Bioconductor version: 3.4
Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.
Author: Tyler Smith <tyler at plantarum.ca>
Maintainer: Tyler Smith <tyler at plantarum.ca>
Citation (from within R,
enter citation("flowPloidy")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowPloidy")
Documentation
| HTML | R Script | flowPloidy: Overview |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | FlowCytometry, GUI, Regression, Software, Visualization |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
| License | GPL-3 |
| Depends | R (>= 3.3) |
| Imports | flowCore, car, caTools, knitr, rmarkdown, minpack.lm, shiny, methods, graphics, stats, utils |
| LinkingTo | |
| Suggests | flowPloidyData |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/plantarum/flowPloidy |
| BugReports | https://github.com/plantarum/flowPloidy/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | flowPloidy_1.0.0.tar.gz |
| Windows Binary | flowPloidy_1.0.0.zip |
| Mac OS X 10.9 (Mavericks) | flowPloidy_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/flowPloidy/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/flowPloidy/ |
| Package Downloads Report | Download Stats |
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