To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowCore")

In most cases, you don't need to download the package archive at all.

flowCore

   

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see flowCore.

flowCore: Basic structures for flow cytometry data

Bioconductor version: 3.4

Provides S4 data structures and basic functions to deal with flow cytometry data.

Author: B. Ellis, P. Haaland, F. Hahne, N. Le Meur, N. Gopalakrishnan, J. Spidlen, M. Jiang

Maintainer: M.Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("flowCore")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowCore")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowCore")

 

PDF R Script Basic Functions for Flow Cytometry Data
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, FlowCytometry, Infrastructure, Software
Version 1.40.6
In Bioconductor since BioC 2.0 (R-2.5) (10 years)
License Artistic-2.0
Depends R (>= 2.10.0)
Imports Biobase, BiocGenerics(>= 0.1.14), graph, graphics, methods, rrcov, stats, utils, stats4, corpcor, Rcpp, matrixStats
LinkingTo Rcpp, BH (>= 1.62.0-1)
Suggests Rgraphviz, flowViz, flowStats, testthat, flowWorkspace, flowWorkspaceData, openCyto, knitr, ggcyto, gridExtra
SystemRequirements GNU make, C++11
Enhances
URL
Depends On Me flowBeads, flowBin, flowClean, flowFitExampleData, flowFP, flowMatch, flowStats, flowTrans, flowViz, flowVS, flowWorkspace, ggcyto, healthyFlowData, immunoClust, ncdfFlow, plateCore, QUALIFIER
Imports Me CONFESS, cytofkit, CytoML, flowAI, flowBeads, flowCHIC, flowClust, flowDensity, flowFit, flowMeans, flowMerge, flowPloidy, flowQ, flowQB, FlowSOM, flowStats, flowTrans, flowType, flowUtils, flowViz, ncdfFlow, openCyto, plateCore, QUALIFIER
Suggests Me COMPASS, flowPloidyData, FlowRepositoryR, RchyOptimyx
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source flowCore_1.40.6.tar.gz
Windows Binary flowCore_1.40.6.zip (32- & 64-bit)
Mac OS X 10.9 (Mavericks) flowCore_1.40.6.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/flowCore/tree/release-3.4
Package Short Url http://bioconductor.org/packages/flowCore/
Package Downloads Report Download Stats

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