To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IVAS")

In most cases, you don't need to download the package archive at all.

IVAS

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see IVAS.

Identification of genetic Variants affecting Alternative Splicing

Bioconductor version: 3.4

Identification of genetic variants affecting alternative splicing.

Author: Seonggyun Han, Sangsoo Kim

Maintainer: Seonggyun Han <hangost at ssu.ac.kr>

Citation (from within R, enter citation("IVAS")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IVAS")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IVAS")

PDF	R Script	IVAS : Identification of genetic Variants affecting Alternative Splicing
PDF		Reference Manual
Text		NEWS

biocViews	AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, RNASeq, Regression, SNP, Sequencing, Software, Transcription
Version	1.6.0
In Bioconductor since	BioC 3.1 (R-3.2) (2 years)
License	GPL-2
Depends	R (> 3.0.0), GenomicFeatures
Imports	doParallel, lme4, Matrix, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb
LinkingTo
Suggests	BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	IVAS_1.6.0.tar.gz
Windows Binary	IVAS_1.6.0.zip
Mac OS X 10.9 (Mavericks)	IVAS_1.6.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/IVAS/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/IVAS/
Package Downloads Report	Download Stats

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