scanMiRData

DOI: 10.18129/B9.bioc.scanMiRData  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see scanMiRData.

miRNA Affinity models for the scanMiR package

Bioconductor version: 3.17

This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.

Author: Pierre-Luc Germain [aut] , Michael Soutschek [aut], Fridolin Gross [cre, aut]

Maintainer: Fridolin Gross <fridolin.gross at hest.ethz.ch>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scanMiRData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scanMiRData")

 

HTML	R Script	scanMiRData
PDF		Reference Manual

Details

biocViews	ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data, miRNAData
Version	1.6.0
License	GPL-3
Depends	R (>= 4.0)
Imports	scanMiR, utils
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	scanMiRApp
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	scanMiRData_1.6.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/scanMiRData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/scanMiRData
Package Short Url	https://bioconductor.org/packages/scanMiRData/
Package Downloads Report	Download Stats