DOI: 10.18129/B9.bioc.scMultiome  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see scMultiome.

Collection of Public Single-Cell Multiome (scATAC + scRNAseq) Datasets

Bioconductor version: 3.17

Single cell multiome data, containing chromatin accessibility (scATAC-seq) and gene expression (scRNA-seq) information analyzed with the ArchR package and presented as MultiAssayExperiment objects.

Author: Xiaosai Yao [cre, aut] , Aleksander Chlebowski [aut], Aaron Lun [aut], Shiqi Xie [ctb], Tomasz Wlodarczyk [aut]

Maintainer: Xiaosai Yao <xiaosai.yao at>

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biocViews CellCulture, ExperimentData, ExperimentHub, ExpressionData, GEO, Homo_sapiens_Data, PackageTypeData, SequencingData, SingleCellData, Tissue
Version 1.0.1
License CC BY-SA 4.0
Depends AnnotationHub, ExperimentHub(>= 2.8.1), MultiAssayExperiment, SingleCellExperiment, SummarizedExperiment
Imports AzureStor, DelayedArray, GenomicRanges, HDF5Array, S4Vectors, checkmate, methods, rhdf5
Suggests BiocGenerics, IRanges, Matrix, knitr, rmarkdown, rstudioapi, testthat (>= 3.0.0), devtools, BiocStyle, ExperimentHubData
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