DOI: 10.18129/B9.bioc.panelcn.mops  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see panelcn.mops.

CNV detection tool for targeted NGS panel data

Bioconductor version: 3.17

CNV detection tool for targeted NGS panel data. Extension of the cn.mops package.

Author: Verena Haunschmid [aut], Gundula Povysil [aut, cre]

Maintainer: Gundula Povysil <povysil at>

Citation (from within R, enter citation("panelcn.mops")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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PDF R Script panelcn.mops: Manual for the R package
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biocViews CellBiology, CopyNumberVariation, Genetics, GenomicVariation, Sequencing, Software, VariantDetection
Version 1.22.0
In Bioconductor since BioC 3.6 (R-3.4) (6 years)
License LGPL (>= 2.0)
Depends R (>= 3.5.0), cn.mops, methods, utils, stats, graphics
Imports GenomicRanges, Rsamtools, IRanges, S4Vectors, GenomeInfoDb, grDevices
Suggests knitr, rmarkdown, RUnit, BiocGenerics
Depends On Me
Imports Me
Suggests Me CopyNumberPlots
Links To Me
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