iSEEhex

DOI: 10.18129/B9.bioc.iSEEhex  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see iSEEhex.

iSEE extension for summarising data points in hexagonal bins

Bioconductor version: 3.17

This package provides panels summarising data points in hexagonal bins for `iSEE`. It is part of `iSEEu`, the iSEE universe of panels that extend the `iSEE` package.

Author: Kevin Rue-Albrecht [aut, cre] , Charlotte Soneson [aut] , Federico Marini [aut] , Aaron Lun [aut]

Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("iSEEhex")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iSEEhex")

 

HTML	R Script	Panel universe
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software
Version	1.2.0
In Bioconductor since	BioC 3.16 (R-4.2) (1 year)
License	Artistic-2.0
Depends	SummarizedExperiment, iSEE
Imports	ggplot2, hexbin, methods, shiny
LinkingTo
Suggests	BiocStyle, covr, knitr, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0), scRNAseq, scater
SystemRequirements
Enhances
URL	https://github.com/iSEE/iSEEhex
BugReports	https://support.bioconductor.org/t/iSEEhex
Depends On Me	iSEEu
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	iSEEhex_1.2.0.tar.gz
Windows Binary	iSEEhex_1.2.0.zip
macOS Binary (x86_64)	iSEEhex_1.2.0.tgz
macOS Binary (arm64)	iSEEhex_1.2.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/iSEEhex
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/iSEEhex
Bioc Package Browser	https://code.bioconductor.org/browse/iSEEhex/
Package Short Url	https://bioconductor.org/packages/iSEEhex/
Package Downloads Report	Download Stats