chihaya

DOI: 10.18129/B9.bioc.chihaya  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see chihaya.

Save Delayed Operations to a HDF5 File

Bioconductor version: 3.17

Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

Author: Aaron Lun [cre, aut]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("chihaya")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chihaya")

 

HTML	R Script	User guide
PDF		Reference Manual

Details

biocViews	DataImport, DataRepresentation, Software
Version	1.0.0
In Bioconductor since	BioC 3.17 (R-4.3) (< 6 months)
License	GPL-3
Depends	DelayedArray
Imports	methods, Matrix, rhdf5, Rcpp, HDF5Array
LinkingTo	Rcpp, Rhdf5lib
Suggests	BiocGenerics, S4Vectors, BiocSingular, ResidualMatrix, BiocStyle, testthat, rmarkdown, knitr
SystemRequirements	C++17, GNU make
Enhances
URL
Depends On Me
Imports Me
Suggests Me	alabaster.matrix
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	chihaya_1.0.0.tar.gz
Windows Binary	chihaya_1.0.0.zip
macOS Binary (x86_64)	chihaya_1.0.0.tgz
macOS Binary (arm64)	chihaya_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/chihaya
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/chihaya
Bioc Package Browser	https://code.bioconductor.org/browse/chihaya/
Package Short Url	https://bioconductor.org/packages/chihaya/
Package Downloads Report	Download Stats