Xeva

DOI: 10.18129/B9.bioc.Xeva  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see Xeva.

Analysis of patient-derived xenograft (PDX) data

Bioconductor version: 3.17

The Xeva package provides efficient and powerful functions for patient-drived xenograft (PDX) based pharmacogenomic data analysis. This package contains a set of functions to perform analysis of patient-derived xenograft data. This package was developed by the BHKLab, for further information please see our documentation.

Author: Arvind Mer [aut], Benjamin Haibe-Kains [aut, cre]

Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Xeva")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Xeva")

 

PDF	R Script	The Xeva User's Guide
PDF		Reference Manual
Text		NEWS

Details

biocViews	Classification, GeneExpression, Pharmacogenetics, Pharmacogenomics, Software
Version	1.16.0
In Bioconductor since	BioC 3.9 (R-3.6) (4.5 years)
License	GPL-3
Depends	R (>= 3.6)
Imports	methods, stats, utils, BBmisc, Biobase, grDevices, ggplot2, scales, ComplexHeatmap, parallel, doParallel, Rmisc, grid, nlme, PharmacoGx, downloader
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
BugReports	https://github.com/bhklab/Xeva/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Xeva_1.16.0.tar.gz
Windows Binary	Xeva_1.16.0.zip
macOS Binary (x86_64)	Xeva_1.16.0.tgz
macOS Binary (arm64)	Xeva_1.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Xeva
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Xeva
Bioc Package Browser	https://code.bioconductor.org/browse/Xeva/
Package Short Url	https://bioconductor.org/packages/Xeva/
Package Downloads Report	Download Stats