DOI: 10.18129/B9.bioc.PECA  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see PECA.

Probe-level Expression Change Averaging

Bioconductor version: 3.17

Calculates Probe-level Expression Change Averages (PECA) to identify differential expression in Affymetrix gene expression microarray studies or in proteomic studies using peptide-level mesurements respectively.

Author: Tomi Suomi, Jukka Hiissa, Laura L. Elo

Maintainer: Tomi Suomi <tomi.suomi at>

Citation (from within R, enter citation("PECA")):


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PDF R Script PECA: Probe-level Expression Change Averaging
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, DifferentialSplicing, ExonArray, GeneExpression, Microarray, Proteomics, Software
Version 1.36.0
In Bioconductor since BioC 2.14 (R-3.1) (9.5 years)
License GPL (>= 2)
Depends R (>= 3.3)
Imports ROTS, limma, affy, genefilter, preprocessCore, aroma.affymetrix, aroma.core
Suggests SpikeIn
Depends On Me
Imports Me
Suggests Me
Links To Me
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