DOI: 10.18129/B9.bioc.MuData  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see MuData.

Serialization for MultiAssayExperiment Objects

Bioconductor version: 3.17

Save MultiAssayExperiments to h5mu files supported by muon and mudata. Muon is a Python framework for multimodal omics data analysis. It uses an HDF5-based format for data storage.

Author: Danila Bredikhin [aut, cre] , Ilia Kats [aut]

Maintainer: Danila Bredikhin <danila.bredikhin at>

Citation (from within R, enter citation("MuData")):


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HTML R Script Blood CITE-seq with MuData
HTML R Script Cord Blood CITE-seq with MuData
HTML R Script Getting started with MuDataMae
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Text   NEWS


biocViews DataImport, Software
Version 1.4.0
In Bioconductor since BioC 3.15 (R-4.2) (1.5 years)
License GPL-3
Depends Matrix, S4Vectors, rhdf5
Imports methods, stats, MultiAssayExperiment, SingleCellExperiment, SummarizedExperiment, DelayedArray
Suggests HDF5Array, rmarkdown, knitr, fs, testthat, BiocStyle, covr, SingleCellMultiModal, CiteFuse, scater
Depends On Me
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