DOI: 10.18129/B9.bioc.MatrixGenerics  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see MatrixGenerics.

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

Bioconductor version: 3.17

S4 generic functions modeled after the 'matrixStats' API for alternative matrix implementations. Packages with alternative matrix implementation can depend on this package and implement the generic functions that are defined here for a useful set of row and column summary statistics. Other package developers can import this package and handle a different matrix implementations without worrying about incompatibilities.

Author: Constantin Ahlmann-Eltze [aut] , Peter Hickey [aut, cre] , Hervé Pagès [aut]

Maintainer: Peter Hickey <peter.hickey at>

Citation (from within R, enter citation("MatrixGenerics")):


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biocViews Infrastructure, Software
Version 1.12.3
In Bioconductor since BioC 3.11 (R-4.0) (3.5 years)
License Artistic-2.0
Depends matrixStats (>= 1.0.0)
Imports methods
Suggests Matrix, sparseMatrixStats, SparseArray, DelayedArray, DelayedMatrixStats, SummarizedExperiment, testthat (>= 2.1.0)
Depends On Me DelayedArray, DelayedMatrixStats, GenomicFiles, SparseArray, sparseMatrixStats, SummarizedExperiment, VariantAnnotation
Imports Me CoreGx, crisprDesign, escape, genefilter, glmGamPoi, imcRtools, lineagespot, miaSim, MinimumDistance, PDATK, RaggedExperiment, scFeatures, scone, scPCA, shinyMethyl, spatzie, TENxIO, tLOH, transformGamPoi, universalmotif, VanillaICE
Suggests Me bnem, MungeSumstats
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