DOI: 10.18129/B9.bioc.MDTS  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see MDTS.

Detection of de novo deletion in targeted sequencing trios

Bioconductor version: 3.17

A package for the detection of de novo copy number deletions in targeted sequencing of trios with high sensitivity and positive predictive value.

Author: Jack M.. Fu [aut, cre]

Maintainer: Jack M.. Fu <jmfu at>

Citation (from within R, enter citation("MDTS")):


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biocViews Coverage, DataImport, Sequencing, Software, StatisticalMethod, TargetedResequencing, Technology
Version 1.20.0
In Bioconductor since BioC 3.7 (R-3.5) (5.5 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports GenomicAlignments, GenomicRanges, IRanges, Biostrings, DNAcopy, Rsamtools, parallel, stringr
Suggests testthat, knitr
Depends On Me
Imports Me
Suggests Me
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Source Package MDTS_1.20.0.tar.gz
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