IMAS

DOI: 10.18129/B9.bioc.IMAS  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see IMAS.

Integrative analysis of Multi-omics data for Alternative Splicing

Bioconductor version: 3.17

Integrative analysis of Multi-omics data for Alternative splicing.

Author: Seonggyun Han, Younghee Lee

Maintainer: Seonggyun Han <hangost at ssu.ac.kr>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IMAS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IMAS")

 

PDF	R Script	IMAS : Integrative analysis of Multi-omics data for Alternative Splicing
PDF		Reference Manual
Text		NEWS

Details

biocViews	AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, ImmunoOncology, RNASeq, Regression, SNP, Sequencing, Software, Transcription
Version	1.24.0
In Bioconductor since	BioC 3.5 (R-3.4) (6.5 years)
License	GPL-2
Depends	R (> 3.0.0), GenomicFeatures, ggplot2, IVAS
Imports	doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, stats, ggfortify, grDevices, methods, Matrix, utils, graphics, gridExtra, grid, lattice, Rsamtools, survival, BiocParallel, GenomicAlignments, parallel
LinkingTo
Suggests	BiocStyle, RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	IMAS_1.24.0.tar.gz
Windows Binary	IMAS_1.24.0.zip
macOS Binary (x86_64)	IMAS_1.24.0.tgz
macOS Binary (arm64)	IMAS_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/IMAS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/IMAS
Bioc Package Browser	https://code.bioconductor.org/browse/IMAS/
Package Short Url	https://bioconductor.org/packages/IMAS/
Package Downloads Report	Download Stats