DOI: 10.18129/B9.bioc.EnMCB  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see EnMCB.

Predicting Disease Progression Based on Methylation Correlated Blocks using Ensemble Models

Bioconductor version: 3.17

Creation of the correlated blocks using DNA methylation profiles. Machine learning models can be constructed to predict differentially methylated blocks and disease progression.

Author: Xin Yu

Maintainer: Xin Yu <whirlsyu at gmail.com>

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biocViews DNAMethylation, MethylationArray, Normalization, Software, SupportVectorMachine
Version 1.12.0
In Bioconductor since BioC 3.11 (R-4.0) (3.5 years)
License GPL-2
Depends R (>= 4.0)
Imports survivalROC, glmnet, rms, mboost, Matrix, igraph, methods, survivalsvm, ggplot2, boot, e1071, survival, BiocFileCache
Suggests SummarizedExperiment, testthat, Biobase, survminer, affycoretools, knitr, plotROC, limma, rmarkdown
BugReports https://github.com/whirlsyu/EnMCB/issues
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Source Package EnMCB_1.12.0.tar.gz
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