DOI: 10.18129/B9.bioc.AnVILPublish  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see AnVILPublish.

Publish Packages and Other Resources to AnVIL Workspaces

Bioconductor version: 3.17

Use this package to create or update AnVIL workspaces from resources such as R / Bioconductor packages. The metadata about the package (e.g., select information from the package DESCRIPTION file and from vignette YAML headings) are used to populate the 'DASHBOARD'. Vignettes are translated to python notebooks ready for evaluation in AnVIL.

Author: Martin Morgan [aut, cre] , Kayla Interdonato [aut], Vincent Carey [ctb]

Maintainer: Martin Morgan <mtmorgan.bioc at>

Citation (from within R, enter citation("AnVILPublish")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script Publishing R / Bioconductor packages to AnVIL Workspaces
PDF   Reference Manual
Text   NEWS


biocViews Infrastructure, Software
Version 1.10.0
In Bioconductor since BioC 3.12 (R-4.0) (3 years)
License Artistic-2.0
Imports AnVIL, httr, jsonlite, rmarkdown, yaml, readr, whisker, tools, utils, stats
Suggests knitr, BiocStyle, BiocManager, testthat (>= 3.0.0)
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package AnVILPublish_1.10.0.tar.gz
Windows Binary
macOS Binary (x86_64) AnVILPublish_1.10.0.tgz
macOS Binary (arm64) AnVILPublish_1.10.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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