ncdfFlow

DOI: 10.18129/B9.bioc.ncdfFlow    

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Bioconductor version: Release (3.16)

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

Author: Mike Jiang,Greg Finak,N. Gopalakrishnan

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("ncdfFlow")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ncdfFlow")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncdfFlow")

 

PDF R Script Basic Functions for Flow Cytometry Data
PDF   Reference Manual
Text   README
Text   NEWS
Text   LICENSE

Details

biocViews FlowCytometry, ImmunoOncology, Software
Version 2.44.0
In Bioconductor since BioC 2.9 (R-2.14) (11 years)
License AGPL-3.0-only
Depends R (>= 2.14.0), flowCore(>= 1.51.7), methods, BH
Imports Biobase, BiocGenerics, flowCore, zlibbioc
LinkingTo cpp11, BH, Rhdf5lib
Suggests testthat, parallel, flowStats, knitr
SystemRequirements
Enhances
URL
Depends On Me ggcyto
Imports Me flowStats, flowWorkspace, openCyto
Suggests Me COMPASS, cydar
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ncdfFlow_2.44.0.tar.gz
Windows Binary ncdfFlow_2.44.0.zip
macOS Binary (x86_64) ncdfFlow_2.44.0.tgz
macOS Binary (arm64) ncdfFlow_2.44.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ncdfFlow
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ncdfFlow
Package Short Url https://bioconductor.org/packages/ncdfFlow/
Package Downloads Report Download Stats

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