DOI: 10.18129/B9.bioc.ppiData    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.15 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ppiData.

A package that contains the bait to prey directed graphs for protein-protein interactions

Bioconductor version: 3.15

This package contains the directed graphs for protein interaction data as derived from Y2H and APMS. It also includes the code used to obtain the y2h data from IntAct Repository.

Author: Tony Chiang

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("ppiData")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script ppiData: Quick Start
PDF   Reference Manual


biocViews ExperimentData
Version 0.34.0
License Artistic-2.0
Depends graph
Imports AnnotationDbi
Suggests org.Sc.sgd.db, ppiStats, rmarkdown, knitr, BiocStyle
Depends On Me
Imports Me
Suggests Me ppiStats, ScISI
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package ppiData_0.34.0.tar.gz
Windows Binary
macOS Binary (x86_64)
Source Repository git clone https://git.bioconductor.org/packages/ppiData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ppiData
Package Short Url https://bioconductor.org/packages/ppiData/
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