BSgenome.Dmelanogaster.UCSC.dm3

DOI: 10.18129/B9.bioc.BSgenome.Dmelanogaster.UCSC.dm3    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Dmelanogaster.UCSC.dm3.

Full genome sequences for Drosophila melanogaster (UCSC version dm3)

Bioconductor version: 3.13

Full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm3, Apr. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Dmelanogaster.UCSC.dm3")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, BSgenome, Drosophila_melanogaster, Genetics
Version	1.4.0
License	Artistic-2.0
Depends	BSgenome(>= 1.33.5)
Imports	BSgenome
LinkingTo
Suggests	TxDb.Dmelanogaster.UCSC.dm3.ensGene
SystemRequirements
Enhances
URL
Depends On Me	BSgenome.Dmelanogaster.UCSC.dm3.masked
Imports Me	BSgenome.Dmelanogaster.UCSC.dm3.masked
Suggests Me	Biostrings, ChIPanalyser, easyRNASeq, GenomicAlignments, GenomicFeatures, gmapR, memes, PWMEnrich
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Dmelanogaster.UCSC.dm3_1.4.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url	https://bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm3/
Package Downloads Report	Download Stats