Mulder2012

DOI: 10.18129/B9.bioc.Mulder2012    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Mulder2012.

Predicting functional networks and modules of chromatin factors controlling adult stem cell fate from RNA interference screens

Bioconductor version: 3.12

This package provides functions to reproduce results and figures in Mulder K. et. al. published in Nature Cell Biology 2012 and Wang X. et. al. published in PLoS Computational Biology 2012.

Author: Xin Wang <Xin.Wang at cancer.org.uk>, Florian Markowetz <Florian.Markowetz at cancer.org.uk>

Maintainer: Xin Wang <Xin.Wang at cancer.org.uk>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Mulder2012")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CancerData, ExperimentData, StemCell
Version	0.30.0
License	Artistic-2.0
Depends	R (>= 2.14), org.Hs.eg.db, KEGG.db
Imports	igraph, HTSanalyzeR, PANR, RedeR, pvclust, MASS
LinkingTo
Suggests	snow
SystemRequirements
Enhances
URL
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/Mulder2012
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Mulder2012
Package Short Url	https://bioconductor.org/packages/Mulder2012/
Package Downloads Report	Download Stats