DOI: 10.18129/B9.bioc.Mulder2012    

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see Mulder2012.

Predicting functional networks and modules of chromatin factors controlling adult stem cell fate from RNA interference screens

Bioconductor version: 3.10

This package provides functions to reproduce results and figures in Mulder K. et. al. published in Nature Cell Biology 2012 and Wang X. et. al. published in PLoS Computational Biology 2012.

Author: Xin Wang <Xin.Wang at>, Florian Markowetz <Florian.Markowetz at>

Maintainer: Xin Wang <Xin.Wang at>

Citation (from within R, enter citation("Mulder2012")):


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PDF R Script Main vignette:Posterior association network and enriched functional gene modules inferred from rich phenotypes of gene perturbations
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biocViews CancerData, ExperimentData, StemCell
Version 0.26.0
License Artistic-2.0
Depends R (>= 2.14),, KEGG.db
Imports igraph, HTSanalyzeR, PANR, RedeR, pvclust, MASS
Suggests snow
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