DOI: 10.18129/B9.bioc.BSgenome.Hsapiens.UCSC.hg19    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Hsapiens.UCSC.hg19.

Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)

Bioconductor version: 3.12

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg19, based on GRCh37.p13) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg19")):


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biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version 1.4.3
License Artistic-2.0
Depends BSgenome(>= 1.54.0)
Imports BSgenome
Depends On Me annotation, BSgenome.Hsapiens.UCSC.hg19.masked, chimera, CODEX, SCOPE, sequencing, traseR, variants
Imports Me appreci8R, brainflowprobes, BSgenome.Hsapiens.UCSC.hg19.masked, ChIPComp, circRNAprofiler, decompTumor2Sig, HiLDA, MADSEQ, musicatk, RareVariantVis, RCAS, TCGAWorkflow, trena, uncoverappLib, YAPSA
Suggests Me AneuFinder, ArrayTV, ATACseqQC, BadRegionFinder, Basic4Cseq, BBCAnalyzer, biovizBase, ChIPpeakAnno, chromVAR, CNEr, CNVfilteR, CRISPRseek, customProDB, DAMEfinder, DNAshapeR, esATAC, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, gcapc, GenomicAlignments, GenomicFeatures, GenomicRanges, GenomicScores, GenVisR, ggbio, gmapR, GUIDEseq, Gviz, h5vc, InPAS, IntEREst, IsoformSwitchAnalyzeR, karyoploteR, MEDIPS, MesKit, MinimumDistance, MiRaGE, motifbreakR, motifmatchr, MutationalPatterns, ORFik, OrganismDbi, pageRank, PGA, plyranges, qsea, R453Plus1Toolbox, Rariant, REMP, rGADEM, RiboProfiling, Rsamtools, RSVSim, rtracklayer, SGSeq, signeR, SigsPack, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20120608, SNPlocs.Hsapiens.dbSNP142.GRCh37, SNPlocs.Hsapiens.dbSNP144.GRCh37, StructuralVariantAnnotation, UMI4Cats, VariantAnnotation, wavClusteR, XtraSNPlocs.Hsapiens.dbSNP144.GRCh37
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