frmaTools

DOI: 10.18129/B9.bioc.frmaTools    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see frmaTools.

Frozen RMA Tools

Bioconductor version: 3.11

Tools for advanced use of the frma package.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("frmaTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frmaTools")

 

PDF	R Script	frmaTools: Create packages containing the vectors used by frma.
PDF		Reference Manual

Details

biocViews	Microarray, Preprocessing, Software
Version	1.40.0
In Bioconductor since	BioC 2.6 (R-2.11) (10.5 years)
License	GPL (>= 2)
Depends	R (>= 2.10.0), affy
Imports	Biobase, DBI, methods, preprocessCore, stats, utils
LinkingTo
Suggests	oligo, pd.huex.1.0.st.v2, pd.hugene.1.0.st.v1, frma, affyPLM, hgu133aprobe, hgu133atagprobe, hgu133plus2probe, hgu133acdf, hgu133atagcdf, hgu133plus2cdf, hgu133afrmavecs, frmaExampleData
SystemRequirements
Enhances
URL	http://bioconductor.org
Depends On Me
Imports Me	DeSousa2013
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	frmaTools_1.40.0.tar.gz
Windows Binary	frmaTools_1.40.0.zip
macOS 10.13 (High Sierra)	frmaTools_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/frmaTools
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/frmaTools
Package Short Url	https://bioconductor.org/packages/frmaTools/
Package Downloads Report	Download Stats