flowViz

DOI: 10.18129/B9.bioc.flowViz    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see flowViz.

Visualization for flow cytometry

Bioconductor version: 3.11

Provides visualization tools for flow cytometry data.

Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>, Jake Wagner <jpwagner at fhcrc.org>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowViz")

 

HTML	R Script	Visualizing Gates with Flow Cytometry Data
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization
Version	1.52.0
In Bioconductor since	BioC 2.0 (R-2.5) (13.5 years)
License	Artistic-2.0
Depends	R (>= 2.7.0), flowCore(>= 1.41.9), lattice
Imports	stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc
LinkingTo
Suggests	colorspace, flowStats, knitr, testthat
SystemRequirements
Enhances
URL
Depends On Me	flowFP, flowTrans, flowVS, QUALIFIER
Imports Me	flowClust, flowDensity, flowFit, flowStats, flowTrans, openCyto, QUALIFIER
Suggests Me	flowBeads, flowClean, flowCore, flowTime, ggcyto
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowViz_1.52.0.tar.gz
Windows Binary	flowViz_1.52.0.zip
macOS 10.13 (High Sierra)	flowViz_1.52.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowViz
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowViz
Package Short Url	https://bioconductor.org/packages/flowViz/
Package Downloads Report	Download Stats