To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("CNORdt")
In most cases, you don't need to download the package archive at all.
CNORdt
Add-on to CellNOptR: Discretized time treatments
Bioconductor version: 3.1
This add-on to the package CellNOptR handles time-course data, as opposed to steady state data in CellNOptR. It scales the simulation step to allow comparison and model fitting for time-course data. Future versions will optimize delays and strengths for each edge.
Author: A. MacNamara
Maintainer: A. MacNamara <aidan.macnamara at ebi.ac.uk>
Citation (from within R,
enter citation("CNORdt")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("CNORdt")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNORdt")
| R Script | Using multiple time points to train logic models to data | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, CellBiology, Proteomics, Software, TimeCourse |
| Version | 1.10.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) (3 years) |
| License | GPL-2 |
| Depends | R (>= 1.8.0), CellNOptR(>= 0.99), abind |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CNORdt_1.10.0.tar.gz |
| Windows Binary | CNORdt_1.10.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | CNORdt_1.10.0.tgz |
| Mac OS X 10.9 (Mavericks) | CNORdt_1.10.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CNORdt/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/CNORdt/ |
| Package Downloads Report | Download Stats |
Documentation »
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