CNOlistPB |
Toy data |
computeScoreDT |
Compute the score of a model/data (time-course) set using a bitString to cut the model. |
convert2array |
Converts the output of simulatorDT to a 3D array for other functions |
cutAndPlotResultsDT |
Plot the results of a time-course optimization |
gaBinaryDT |
Genetic algorithm for optimizing models using multiple time-points |
getFitDT |
The optimization function that finds the scaling factor for the boolean simulation |
modelPB |
modelPB |
simulatorDT |
Discrete time simulation of a boolean model |