To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm10")

In most cases, you don't need to download the package archive at all.

BSgenome.Mmusculus.UCSC.mm10

Full genome sequences for Mus musculus (UCSC version mm10)

Bioconductor version: 3.0

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, Dec. 2011) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm10")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm10")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
LinkingTo
Suggests TxDb.Mmusculus.UCSC.mm10.knownGene
SystemRequirements
Enhances
URL
Depends On Me BSgenome.Mmusculus.UCSC.mm10.masked
Imports Me BSgenome.Mmusculus.UCSC.mm10.masked
Suggests Me MiRaGE

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Mmusculus.UCSC.mm10_1.4.0.tar.gz
Windows Binary BSgenome.Mmusculus.UCSC.mm10_1.4.0.zip
Mac OS X 10.6 (Snow Leopard) BSgenome.Mmusculus.UCSC.mm10_1.4.0.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Mmusculus.UCSC.mm10_1.4.0.tgz
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