To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("ROC")
In most cases, you don't need to download the package archive at all.
ROC
utilities for ROC, with uarray focus
Bioconductor version: 3.0
utilities for ROC, with uarray focus
Author: Vince Carey <stvjc at channing.harvard.edu>, Henning Redestig for C++ language enhancements
Maintainer: Vince Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("ROC")):
Installation
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("ROC")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ROC")
| R Script | ROC notes | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Software |
| Version | 1.42.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier |
| License | Artistic-2.0 |
| Depends | R (>= 1.9.0), utils, methods |
| Imports | |
| LinkingTo | |
| Suggests | Biobase |
| SystemRequirements | |
| Enhances | |
| URL | http://www.bioconductor.org |
| Depends On Me | maPredictDSC, TCC, wateRmelon |
| Imports Me | clst |
| Suggests Me | genefilter, MCRestimate |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | ROC_1.42.0.tar.gz |
| Windows Binary | ROC_1.42.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | ROC_1.42.0.tgz |
| Mac OS X 10.9 (Mavericks) | ROC_1.42.0.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
- RNA-Seq workflow: gene-level exploratory analysis and differential expression
- Changing genomic coordinate systems with rtracklayer::liftOver
- Mass spectrometry and proteomics data analysis
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