ccTutorial

Data package for ChIP-chip tutorial

Bioconductor version: 2.9

This is a data package that accompanies a ChIP-chip tutorial, which has been published in PLoS Computational Biology. The data and source code in this package allow the reader to completely reproduce the steps in the tutorial.

Author: Joern Toedling, Wolfgang Huber

Maintainer: Joern Toedling <joern.toedling at curie.fr>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ccTutorial")

To cite this package in a publication, start R and enter:

    citation("ccTutorial")

Documentation

PDF	R Script	A tutorial on how to analyze ChIP-chip readouts using Bioconductor
PDF	R Script	Supplement to A tutorial on how to analyze ChIP-chip readouts using Bioconductor
PDF		Reference Manual

Details

biocViews	ExperimentData, ChIPchipData
Depends	R (>= 2.10), Ringo(>= 1.9.8), affy(>= 1.23.4), topGO(>= 1.13.1)
Imports	Biobase
Suggests	biomaRt, Biobase(>= 2.5.5), xtable
System Requirements
License	Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version	1.0.20

Package Downloads

Package Source	ccTutorial_1.0.20.tar.gz
Windows Binary	ccTutorial_1.0.20.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	ccTutorial_1.0.20.tgz
Package Downloads Report	Download Stats

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