Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: 2.9

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <bernd.fischer at embl.de>

Maintainer: Bernd Fischer <bernd.fischer at embl.de>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script RNAinteractMAPK
PDF   Reference Manual


biocViews ExperimentData
Depends R (>= 2.12.0), fields, sparseLDA, RNAinteract
Imports grid, gdata, crossdes, MASS, genefilter
Suggests qvalue
System Requirements
License Artistic-2.0
Depends On Me
Imports Me
Suggests Me
Version 1.0.3

Package Downloads

Package Source RNAinteractMAPK_1.0.3.tar.gz
Windows Binary RNAinteractMAPK_1.0.3.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary RNAinteractMAPK_1.0.3.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:


Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center