a4Base
Automated Affymetrix Array Analysis Base Package
Bioconductor version: 2.9
Automated Affymetrix Array Analysis
Author: Willem Talloen, Tobias Verbeke, Tine Casneuf, An De Bondt, Steven Osselaer and Hinrich Goehlmann
Maintainer: Tobias Verbeke <tobias.verbeke at openanalytics.eu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("a4Base")
To cite this package in a publication, start R and enter:
citation("a4Base")
Documentation
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Bioinformatics, Microarray |
| Depends | methods, graphics, grid, Biobase, AnnotationDbi, annaffy, mpm, genefilter, limma, multtest, glmnet, a4Preproc, a4Core, gplots |
| Imports | |
| Suggests | Cairo, ALL |
| System Requirements | |
| License | GPL-3 |
| URL | |
| Depends On Me | a4 |
| Imports Me | |
| Suggests Me | |
| Version | 1.2.3 |
| Since | Bioconductor 2.8 (R-2.13) |
Package Downloads
| Package Source | a4Base_1.2.3.tar.gz |
| Windows Binary | a4Base_1.2.3.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | a4Base_1.2.3.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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