NCIgraph

Pathways from the NCI Pathways Database

Bioconductor version: 2.9

Provides various methods to load the pathways from the NCI Pathways Database in R graph objects and to re-format them.

Author: Laurent Jacob

Maintainer: Laurent Jacob <laurent.jacob at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("NCIgraph")

To cite this package in a publication, start R and enter:

    citation("NCIgraph")

PDF	R Script	NCIgraph: networks from the NCI pathway integrated database as graphNEL objects.
PDF		Reference Manual

biocViews	Bioinformatics, GraphsAndNetworks
Depends	graph, R (>= 2.10.0)
Imports	graph, KEGGgraph, methods, RBGL, RCytoscape, R.methodsS3
Suggests	Rgraphviz
System Requirements
License	GPL-3
URL
Depends On Me
Imports Me	DEGraph
Suggests Me	DEGraph
Version	1.2.0
Since	Bioconductor 2.8 (R-2.13)

Common Bioconductor workflows include:

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