MmPalateMiRNA

Murine Palate miRNA Expression Analysis

Bioconductor version: 2.9

R package compendium for the analysis of murine palate miRNA two-color expression data.

Author: Guy Brock <guy.brock at louisville.edu>, Partha Mukhopadhyay <p0mukh01 at louisville.edu>, Vasyl Pihur <vasyl.pihur at louisville.edu>, Robert M. Greene <Dr.Bob.Greene at gmail.com>, and M. Michele Pisano <mmpisa01 at louisville.edu>

Maintainer: Guy Brock <guy.brock at louisville.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("MmPalateMiRNA")

To cite this package in a publication, start R and enter:

    citation("MmPalateMiRNA")

Documentation

PDF	R Script	Palate miRNA Analysis
PDF		Reference Manual

Details

biocViews	Microarray, TwoChannel, Bioinformatics, QualityControl, Preprocessing, DifferentialExpression, MultipleComparisons, Clustering, GO, Pathways, ReportWriting, SequenceMatching
Depends	R (>= 2.13.0), methods, Biobase, xtable, limma, statmod, lattice, vsn
Imports	limma, lattice, Biobase
Suggests	GOstats, graph, Category, org.Mm.eg.db, microRNA, targetscan.Mm.eg.db, RSQLite, DBI, AnnotationDbi, clValid, class, cluster, multtest, RColorBrewer, latticeExtra
System Requirements
License	LGPL-3
URL
Depends On Me
Imports Me
Suggests Me
Version	1.2.0
Since	Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source	MmPalateMiRNA_1.2.0.tar.gz
Windows Binary	MmPalateMiRNA_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	MmPalateMiRNA_1.2.0.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center