MmPalateMiRNA

Murine Palate miRNA Expression Analysis

Bioconductor version: 2.9

R package compendium for the analysis of murine palate miRNA two-color expression data.

Author: Guy Brock <guy.brock at louisville.edu>, Partha Mukhopadhyay <p0mukh01 at louisville.edu>, Vasyl Pihur <vasyl.pihur at louisville.edu>, Robert M. Greene <Dr.Bob.Greene at gmail.com>, and M. Michele Pisano <mmpisa01 at louisville.edu>

Maintainer: Guy Brock <guy.brock at louisville.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("MmPalateMiRNA")

To cite this package in a publication, start R and enter:

    citation("MmPalateMiRNA")

Documentation

PDF R Script Palate miRNA Analysis
PDF   Reference Manual

Details

biocViews Microarray, TwoChannel, Bioinformatics, QualityControl, Preprocessing, DifferentialExpression, MultipleComparisons, Clustering, GO, Pathways, ReportWriting, SequenceMatching
Depends R (>= 2.13.0), methods, Biobase, xtable, limma, statmod, lattice, vsn
Imports limma, lattice, Biobase
Suggests GOstats, graph, Category, org.Mm.eg.db, microRNA, targetscan.Mm.eg.db, RSQLite, DBI, AnnotationDbi, clValid, class, cluster, multtest, RColorBrewer, latticeExtra
System Requirements
License LGPL-3
URL
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source MmPalateMiRNA_1.2.0.tar.gz
Windows Binary MmPalateMiRNA_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary MmPalateMiRNA_1.2.0.tgz
Package Downloads Report Download Stats

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