EBImage

Image processing toolbox for R

Bioconductor version: 2.9

EBImage is an R package which provides general purpose functionality for the reading, writing, processing and analysis of images. Furthermore, in the context of microscopy based cellular assays, EBImage offers tools to transform the images, segment cells and extract quantitative cellular descriptors.

Author: Oleg Sklyar, Gregoire Pau, Mike Smith, Wolfgang Huber

Maintainer: Gregoire Pau <gpau at ebi.ac.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("EBImage")

To cite this package in a publication, start R and enter:

    citation("EBImage")

Documentation

PDF	R Script	EBImage installation
PDF	R Script	Introduction to EBImage
PDF		Reference Manual

Details

biocViews	Visualization
Depends	R (>= 2.8.0), methods, graphics, stats, utils, abind
Imports
Suggests
System Requirements	ImageMagick (>= 6.3.7), GTK+ (> 2.6)
License	Artistic-2.0
URL
Depends On Me	CRImage, imageHTS
Imports Me
Suggests Me	HilbertVis
Version	3.10.0
Since	Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source	EBImage_3.10.0.tar.gz
Windows Binary	EBImage_3.10.0.zip (32-bit only)
MacOS 10.5 (Leopard) binary
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center