Normalization of array CGH data with imbalanced aberrations.

Bioconductor version: 2.9

Normalization of array comparative genomic hybridization (aCGH) data. The algorithm uses an iterative procedure that effectively eliminates the influence of imbalanced copy numbers. This leads to a more reliable assessment of copy number alterations (CNAs).

Author: Bart P.P. van Houte, Thomas W. Binsl, Hannes Hettling

Maintainer: Bart P.P. van Houte <bvhoute at>

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PDF R Script CGHnormaliter
PDF CGHnormaliter-method.pdf
PDF   Reference Manual


biocViews Microarray, Preprocessing
Depends CGHcall(>= 2.2.0), CGHbase(>= 1.2.0)
Imports Biobase, CGHbase, CGHcall, methods, stats, utils
System Requirements
License GPL (>= 3)
Depends On Me
Imports Me
Suggests Me
Version 1.8.0
Since Bioconductor 2.5 (R-2.10)

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Package Source CGHnormaliter_1.8.0.tar.gz
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MacOS 10.5 (Leopard) binary CGHnormaliter_1.8.0.tgz
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