To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mcaGUI")

In most cases, you don't need to download the package archive at all.

mcaGUI

   

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see mcaGUI.

Microbial Community Analysis GUI

Bioconductor version: 2.8

Microbial community analysis GUI for R using gWidgets.

Author: Wade K. Copeland, Vandhana Krishnan, Daniel Beck, Matt Settles, James Foster, Kyu-Chul Cho, Mitch Day, Roxana Hickey, Ursel M.E. Schutte, Xia Zhou, Chris Williams, Larry J. Forney, Zaid Abdo, Poor Man's GUI (PMG) base code by John Verzani with contributions by Yvonnick Noel

Maintainer: Wade K. Copeland <wade at kingcopeland.com>

Citation (from within R, enter citation("mcaGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mcaGUI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mcaGUI")

 

PDF An_Introduction_and_User_Guide_for_mcaGUI.pdf
PDF   Reference Manual

Details

biocViews Bioinformatics, Clustering, GUI, Sequencing, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 2.8 (R-2.13) (5 years)
License GPL (>= 2)
Depends lattice, MASS, proto, foreign, gWidgets (>= 0.0-36), gWidgetsRGtk2 (>= 0.0-53), OTUbase, vegan, bpca
Imports
LinkingTo
Suggests
SystemRequirements
Enhances iplots, reshape, ggplot2, cairoDevice, OTUbase
URL http://www.ibest.uidaho.edu/ibest/index.php
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source mcaGUI_1.0.0.tar.gz
Windows Binary mcaGUI_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/mcaGUI/tree/release-2.8
Package Short Url http://bioconductor.org/packages/mcaGUI/
Package Downloads Report Download Stats

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